Transcript: LINC02297:5

Basic information

LNCipedia transcript ID: LINC02297:5 
HGNC Gene Symbol: LINC02297    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2297
Ensembl Gene ID: ENSG00000257504
Ensembl Transcript ID: ENST00000548050
Location (hg38): chr14:18630318-18633634
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1493 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000548050; ENST00000548050.1; RP11-536C10.7-001; OTTHUMT00000408404.1; NONHSAT035440
Alternative gene names: ENSG00000257504; RP11-536C10.7; ENSG00000257504.1; OTTHUMG00000170300.1; LINC02297


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.1233 non-coding 
CPAT coding probability 1.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02297:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POTEM-7:1
3.1 lnc-POTEM-9:1
4.0 lnc-POTEM-9:1
4.1 lnc-POTEM-9:1
5.0 lnc-POTEM-9:1
5.1 LINC02297:2
5.2 LINC02297:5