Transcript: LINC02289:47

Basic information

LNCipedia transcript ID: LINC02289:47 
LNCipedia gene ID: LINC02289
Location (hg38): chr14:77073809-77074716
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 744 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023134; NONHSAT037955
Alternative gene names: XLOC_011081; linc-C14orf4-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.0928 non-coding 
CPAT coding probability 5.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02289:47 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IRF2BPL-1:7
3.1 lnc-IRF2BPL-1:7
4.0 lnc-IRF2BPL-1:7
4.1 lnc-IRF2BPL-1:7
5.0 lnc-IRF2BPL-1:7
5.1 LINC02289:24
5.2 LINC02289:47

loading