Transcript: LINC02265:5

Basic information

LNCipedia transcript ID: LINC02265:5 
HGNC Gene Symbol: LINC02265    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2265
Ensembl Gene ID: ENSG00000249241
Ensembl Transcript ID: ENST00000510551
RefSeq ID: NR_121640
Location (hg38): chr4:40316485-40330419
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 957 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000510551; ENST00000510551.1; AC195454.1-001; OTTHUMT00000360481.1; NONHSAT096129; NR_121640; NR_121640.1
Alternative gene names: ENSG00000249241; AC195454.1; ENSG00000249241.1; OTTHUMG00000160407.1; LINC02265; LOC101060498


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.034 non-coding 
CPAT coding probability 7.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02265:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHRNA9-1:1
3.1 lnc-CHRNA9-1:1
4.0 lnc-CHRNA9-1:1
4.1 lnc-CHRNA9-1:1
5.0 lnc-CHRNA9-1:1
5.1 LINC02265:3
5.2 LINC02265:5