Transcript: LINC02207:13

Basic information

LNCipedia transcript ID: LINC02207:13 
HGNC Gene Symbol: LINC02207    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2207
Ensembl Gene ID: ENSG00000258476
Ensembl Transcript ID: ENST00000555281
Location (hg38): chr15:93865576-93878356
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 396 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000555281; ENST00000555281.1; RP11-76E17.3-002; OTTHUMT00000415173.1; NONHSAT050138
Alternative gene names: ENSG00000258476; RP11-76E17.3; ENSG00000258476.1; OTTHUMG00000171799.1; ENSG00000258476.5; LINC02207


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -152.5914 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02207:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MCTP2-4:3
3.1 lnc-MCTP2-6:3
4.0 lnc-MCTP2-6:3
4.1 lnc-MCTP2-6:3
5.0 lnc-MCTP2-6:3
5.1 LINC02207:7
5.2 LINC02207:13