Transcript: LINC02188:15

Basic information

LNCipedia transcript ID: LINC02188:15 
LNCipedia gene ID: LINC02188
Location (hg38): chr16:86734826-86738074
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 749 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00024898
Alternative gene names: XLOC_011816; linc-MAP1LC3B-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.4448 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02188:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXL1-2:3
3.1 lnc-FOXL1-3:5
4.0 lnc-FOXL1-3:5
4.1 lnc-FOXL1-3:5
5.0 lnc-FOXL1-3:5
5.1 LINC02188:8
5.2 LINC02188:15