Transcript: LINC02182:6

Basic information

LNCipedia transcript ID: LINC02182:6 
LNCipedia gene ID: LINC02182
Location (hg38): chr16:88194133-88195083
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 512 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024511; NONHSAT144376
Alternative gene names: XLOC_011827; linc-ZNF469-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.4784 non-coding 
CPAT coding probability 3.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02182:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BANP-2:1
3.1 lnc-BANP-2:1
4.0 lnc-BANP-2:1
4.1 lnc-BANP-2:1
5.0 lnc-BANP-2:1
5.1 LINC02182:2
5.2 LINC02182:6