Transcript: LINC02175:16

Basic information

LNCipedia transcript ID: LINC02175:16 
LNCipedia gene ID: LINC02175
Location (hg38): chr16:25066924-25074146
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7223 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262155.1|ENCT00000157414.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.4715 non-coding 
CPAT coding probability 2.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02175:16 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LCMT1-1:7
5.0 lnc-LCMT1-1:7
5.1 LINC02175:6
5.2 LINC02175:16