Transcript: LINC02175:15

Basic information

LNCipedia transcript ID: LINC02175:15 
LNCipedia gene ID: LINC02175
Location (hg38): chr16:25066924-25068943
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1888 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262155.1|ENST00000571219.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.1941 non-coding 
CPAT coding probability 1.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02175:15 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LCMT1-1:6
5.0 lnc-LCMT1-1:6
5.1 LINC02175:5
5.2 LINC02175:15