Transcript: LINC02155:3

Basic information

LNCipedia transcript ID: LINC02155:3 
HGNC Gene Symbol: LINC02155    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2155
Ensembl Gene ID: ENSG00000254120
Ensembl Transcript ID: ENST00000519215
Location (hg38): chr8:61889839-61894206
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 407 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000519215; ENST00000519215.1; RP11-705O24.2-001; OTTHUMT00000378346.1; NONHSAT126902
Alternative gene names: ENSG00000254120; RP11-705O24.2; ENSG00000254120.1; OTTHUMG00000164340.1; LINC02155


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -197.5854 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02155:3 no no no no

Available literature

  1. Fan (2016), Identification of a RNA-Seq Based 8-Long Non-Coding RNA Signature Predicting Survival in Esophageal Cancer., Med. Sci. Monit.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NKAIN3-3:1
3.1 lnc-NKAIN3-5:1
4.0 lnc-NKAIN3-5:1
4.1 lnc-NKAIN3-5:1
5.0 lnc-NKAIN3-5:1
5.1 LINC02155:2
5.2 LINC02155:3