Transcript: LINC02153:21

Basic information

LNCipedia transcript ID: LINC02153:21 
LNCipedia gene ID: LINC02153
Ensembl Gene ID: ENSG00000253147
Ensembl Transcript ID: ENST00000523852
Location (hg38): chr8:20953127-20962895
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 874 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523852; ENST00000523852.1; RP11-369E15.4-001; OTTHUMT00000375269.1; NONHSAT125410; ENST00000523852.5
Alternative gene names: ENSG00000253147; RP11-369E15.4; ENSG00000253147.1; OTTHUMG00000163759.1; ENSG00000253147.5; AC015468.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.1494 non-coding 
CPAT coding probability 3.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02153:21 no no no no

Available literature

  1. Cui (2016), Long Non-Coding RNA: Potential Diagnostic and Therapeutic Biomarker for Major Depressive Disorder., Med. Sci. Monit.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATP6V1B2-4:1
3.1 lnc-ATP6V1B2-5:1
4.0 lnc-ATP6V1B2-5:1
4.1 lnc-ATP6V1B2-5:1
5.0 lnc-ATP6V1B2-5:1
5.1 LINC02153:3
5.2 LINC02153:21