Transcript: LINC02145:4

Basic information

LNCipedia transcript ID: LINC02145:4 
HGNC Gene Symbol: LINC02145    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2145
Ensembl Gene ID: ENSG00000250490
Ensembl Transcript ID: ENST00000502644
Location (hg38): chr5:6337239-6339884
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 558 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000502644; ENST00000502644.1; CTD-2324F15.2-002; OTTHUMT00000365708.1; NONHSAT100194
Alternative gene names: ENSG00000250490; CTD-2324F15.2; ENSG00000250490.1; OTTHUMG00000161679.1; FLJ33360; LINC02145


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -178.9222 non-coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02145:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MED10-2:1
3.1 lnc-MED10-2:1
4.0 lnc-MED10-2:1
4.1 lnc-MED10-2:1
5.0 lnc-MED10-2:1
5.1 LINC02145:2
5.2 LINC02145:4