Transcript: LINC02126:10

Basic information

LNCipedia transcript ID: LINC02126:10 
HGNC Gene Symbol: LINC02126    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2126
Ensembl Gene ID: ENSG00000259847
Ensembl Transcript ID: ENST00000563754
RefSeq ID: NR_110918
Location (hg38): chr16:65141756-65176573
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 750 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000563754.1; RP11-95H3.1-001; OTTHUMT00000420596.2; NONHSAT142972; NR_110918; NR_110918.1
Alternative gene names: ENSG00000259847.1; RP11-95H3.1; OTTHUMG00000172809.2; LINC02126; LOC101927650


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -312.3811 non-coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02126:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDH11-1:4
4.0 lnc-CDH11-1:4
4.1 lnc-CDH11-1:4
5.0 lnc-CDH11-1:4
5.1 LINC02126:5
5.2 LINC02126:10