Transcript: LINC02121:4

Basic information

LNCipedia transcript ID: LINC02121:4 
LNCipedia gene ID: LINC02121
Location (hg38): chr5:5069255-5078406
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 464 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT100162
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.5558 non-coding 
CPAT coding probability 4.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02121:4 no no no no

Available literature

  1. Qin (2014), Expression pattern of long non-coding RNAs in renal cell carcinoma revealed by microarray., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MED10-7:2
4.0 lnc-MED10-7:2
4.1 lnc-MED10-7:2
5.0 lnc-MED10-7:2
5.1 LINC02121:2
5.2 LINC02121:4