Transcript: LINC02118:5

Basic information

LNCipedia transcript ID: LINC02118:5 
HGNC Gene Symbol: LINC02118    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2118
Ensembl Gene ID: ENSG00000248789
Ensembl Transcript ID: ENST00000510583
Location (hg38): chr5:52009815-52080987
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 419 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000510583.2
Alternative gene names: ENSG00000248789.5; CTD-2203A3.1; LINC02118


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1113.2496 non-coding 
CPAT coding probability 3.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02118:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CTD-2203A3.1.1-3:2
4.1 lnc-CTD-2203A3.1.1-3:2
5.0 lnc-CTD-2203A3.1.1-3:2
5.1 LINC02118:3
5.2 LINC02118:5