Transcript: LINC02114:5

Basic information

LNCipedia transcript ID: LINC02114:5 
HGNC Gene Symbol: LINC02114    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2114
Ensembl Gene ID: ENSG00000249521
Ensembl Transcript ID: ENST00000503757
RefSeq ID: NR_104619
Location (hg38): chr5:4773481-4774865
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 801 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000503757; ENST00000503757.1; CTD-2161F6.3-001; OTTHUMT00000365584.1; NONHSAT100142; NR_104619; NR_104619.1
Alternative gene names: ENSG00000249521; CTD-2161F6.3; ENSG00000249521.1; OTTHUMG00000161644.1; LINC02114; LOC101929153


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.513 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02114:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADAMTS16-3:1
3.1 lnc-ADAMTS16-3:1
4.0 lnc-ADAMTS16-3:1
4.1 lnc-ADAMTS16-3:1
5.0 lnc-ADAMTS16-3:1
5.1 LINC02114:2
5.2 LINC02114:5