Transcript: LINC02106:12

Basic information

LNCipedia transcript ID: LINC02106:12 
HGNC Gene Symbol: LINC02106    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2106
Ensembl Gene ID: ENSG00000251573
Ensembl Transcript ID: ENST00000513880
Location (hg38): chr5:50969217-50969967
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 225 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000513880; ENST00000513880.2; CTD-2089N3.2-001; OTTHUMT00000368774.2; NONHSAT101380
Alternative gene names: ENSG00000251573; CTD-2089N3.2; ENSG00000251573.2; OTTHUMG00000162408.2; LINC02106


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 3.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02106:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EMB-3:4
3.1 lnc-EMB-3:4
4.0 lnc-EMB-3:4
4.1 lnc-EMB-3:4
5.0 lnc-EMB-3:4
5.1 LINC02106:6
5.2 LINC02106:12