Transcript: LINC02096:6

Basic information

LNCipedia transcript ID: LINC02096:6 
HGNC Gene Symbol: LINC02096    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2096
Ensembl Gene ID: ENSG00000238212
Ensembl Transcript ID: ENST00000445035
Location (hg38): chr17:14834638-14900554
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 953 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000445035.2; AC005863.2-001; OTTHUMT00000129991.2; NONHSAT145782
Alternative gene names: ENSG00000238212.2; AC005863.2; OTTHUMG00000058804.2; LINC02096


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.374 non-coding 
CPAT coding probability 52.49% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02096:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HS3ST3B1-3:1
4.0 lnc-HS3ST3B1-3:1
4.1 lnc-HS3ST3B1-3:1
5.0 lnc-HS3ST3B1-3:1
5.1 LINC02096:3
5.2 LINC02096:6