Transcript: LINC02087:5

Basic information

LNCipedia transcript ID: LINC02087:5 
HGNC Gene Symbol: LINC02087    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2087
Ensembl Gene ID: ENSG00000237057
Ensembl Transcript ID: ENST00000418821
Location (hg38): chr17:15806241-15817742
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 951 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000418821.2; AC015922.6-001; OTTHUMT00000131039.2; NONHSAT145876
Alternative gene names: ENSG00000237057.2; AC015922.6; OTTHUMG00000059147.2; LINC02087


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.4587 non-coding 
CPAT coding probability 8.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02087:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM16-5:1
4.0 lnc-TRIM16-5:1
4.1 lnc-TRIM16-5:1
5.0 lnc-TRIM16-5:1
5.1 LINC02087:2
5.2 LINC02087:5