Transcript: LINC02066:3

Basic information

LNCipedia transcript ID: LINC02066:3 
HGNC Gene Symbol: LINC02066    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2066
Ensembl Gene ID: ENSG00000241151
Ensembl Transcript ID: ENST00000492731
Location (hg38): chr3:151637174-151657966
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 580 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000492731; ENST00000492731.1; RP11-454C18.1-001; OTTHUMT00000357882.1; NONHSAT092733
Alternative gene names: ENSG00000241151; RP11-454C18.1; ENSG00000241151.1; OTTHUMG00000159875.1; LINC02066


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -271.468 non-coding 
CPAT coding probability 6.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02066:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AADACL2-2:1
3.1 lnc-AADACL2-2:1
4.0 lnc-AADACL2-2:1
4.1 lnc-AADACL2-2:1
5.0 lnc-AADACL2-2:1
5.1 LINC02066:2
5.2 LINC02066:3