Transcript: LINC02059:8

Basic information

LNCipedia transcript ID: LINC02059:8 
HGNC Gene Symbol: LINC02059    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2059
Ensembl Gene ID: ENSG00000250544
Ensembl Transcript ID: ENST00000506471
Location (hg38): chr5:86746818-86749772
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2094 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000506471; ENST00000506471.1; CTC-493L21.1-001; OTTHUMT00000369751.1; NONHSAT102576
Alternative gene names: ENSG00000250544; CTC-493L21.1; ENSG00000250544.1; OTTHUMG00000162607.1; LINC02059


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.2331 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02059:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-COX7C-2:2
3.1 lnc-COX7C-2:1
4.0 lnc-COX7C-2:1
4.1 lnc-COX7C-2:1
5.0 lnc-COX7C-2:1
5.1 LINC02059:3
5.2 LINC02059:8