Transcript: LINC02050:23

Basic information

LNCipedia transcript ID: LINC02050:23 
LNCipedia gene ID: LINC02050
Location (hg38): chr3:80771296-80789367
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 479 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006896; NONHSAT090601
Alternative gene names: XLOC_002716; linc-CADM2-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.5573 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02050:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ROBO2-4:5
3.1 lnc-ROBO2-4:5
4.0 lnc-ROBO2-4:5
4.1 lnc-ROBO2-4:5
5.0 lnc-ROBO2-4:5
5.1 LINC02050:11
5.2 LINC02050:23