Transcript: LINC02049:9

Basic information

LNCipedia transcript ID: LINC02049:9 
LNCipedia gene ID: LINC02049
RefSeq ID: NR_135571
Location (hg38): chr3:120833440-120836357
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 744 bp
Exons: 2
Sources: Broad Institute; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00005465; NR_135571.1
Alternative gene names: XLOC_003226; linc-RABL3-2; LOC101926983


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -416.4603 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02049:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RABL3-1:3
3.1 lnc-RABL3-1:3
4.0 lnc-RABL3-1:3
4.1 lnc-RABL3-1:3
5.0 lnc-RABL3-1:3
5.1 LINC02049:4
5.2 LINC02049:9