Transcript: LINC02016:10

Basic information

LNCipedia transcript ID: LINC02016:10 
LNCipedia gene ID: LINC02016
Location (hg38): chr3:127376244-127390603
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 400 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006644; NONHSAT091720
Alternative gene names: XLOC_003239; linc-TXNRD3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.4493 non-coding 
CPAT coding probability 12.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02016:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPRA1-2:3
3.1 lnc-TPRA1-2:3
4.0 lnc-TPRA1-2:3
4.1 lnc-TPRA1-2:3
5.0 lnc-TPRA1-2:3
5.1 LINC02016:5
5.2 LINC02016:10