Transcript: LINC02009:3

Basic information

LNCipedia transcript ID: LINC02009:3 
HGNC Gene Symbol: LINC02009    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2009
Ensembl Gene ID: ENSG00000283646
Ensembl Transcript ID: ENST00000635852
Location (hg38): chr3:46416524-46423591
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2951 bp
Exons: 5
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635852.1
Alternative gene names: ENSG00000283646.1; RP11-24F11.5; LINC02009


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.4179 non-coding 
CPAT coding probability 2.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02009:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LTF-3:1
5.0 lnc-LTF-3:1
5.1 LINC02009:2
5.2 LINC02009:3