Transcript: LINC01988:10

Basic information

LNCipedia transcript ID: LINC01988:10 
LNCipedia gene ID: LINC01988
Location (hg38): chr3:44424110-44429503
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 920 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006821; NONHSAT089314
Alternative gene names: XLOC_002630; linc-ZNF167


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.2719 non-coding 
CPAT coding probability 3.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01988:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C3orf23-1:1
3.1 lnc-C3orf23-1:2
4.0 lnc-C3orf23-1:2
4.1 lnc-C3orf23-1:2
5.0 lnc-C3orf23-1:2
5.1 LINC01988:2
5.2 LINC01988:10