Transcript: LINC01983:9

Basic information

LNCipedia transcript ID: LINC01983:9 
HGNC Gene Symbol: LINC01983    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1983
Ensembl Gene ID: ENSG00000223783
Ensembl Transcript ID: ENST00000413586
Location (hg38): chr3:195836334-195837045
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 574 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000413586; ENST00000413586.1; AC124944.5-003; OTTHUMT00000341848.1; NONHSAT094254
Alternative gene names: ENSG00000223783; AC124944.5; ENSG00000223783.1; OTTHUMG00000155824.1; LINC01983


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.1315 non-coding 
CPAT coding probability 6.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01983:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TNK2-1:3
3.1 lnc-TNK2-1:3
4.0 lnc-TNK2-1:3
4.1 lnc-TNK2-1:3
5.0 lnc-TNK2-1:3
5.1 LINC01983:6
5.2 LINC01983:9