Transcript: LINC01975:3

Basic information

LNCipedia transcript ID: LINC01975:3 
HGNC Gene Symbol: LINC01975    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1975
Ensembl Gene ID: ENSG00000263312
Ensembl Transcript ID: ENST00000571890
Location (hg38): chr17:3977103-3981899
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 549 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000571890.1; RP11-459C13.1-001; OTTHUMT00000438695.1; NONHSAT145041
Alternative gene names: ENSG00000263312.1; RP11-459C13.1; OTTHUMG00000177725.1; LINC01975


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -401.2652 non-coding 
CPAT coding probability 6.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01975:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYB5D2-3:1
4.0 lnc-CYB5D2-3:1
4.1 lnc-CYB5D2-3:1
5.0 lnc-CYB5D2-3:1
5.1 LINC01975:2
5.2 LINC01975:3