Transcript: LINC01965:12

Basic information

LNCipedia transcript ID: LINC01965:12 
LNCipedia gene ID: LINC01965
Location (hg38): chr2:103874310-104080235
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3183 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000256637.2|MICT00000195799.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.6793 non-coding 
CPAT coding probability 34.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01965:12 no no no no

Available literature

  1. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-POU3F3-6:7
5.0 lnc-POU3F3-6:7
5.1 LINC01965:4
5.2 LINC01965:12