Transcript: LINC01961:9

Basic information

LNCipedia transcript ID: LINC01961:9 
LNCipedia gene ID: LINC01961
Location (hg38): chr2:113503604-113508265
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1041 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT073783; FPKM1_group_16966_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.1051 non-coding 
CPAT coding probability 4.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01961:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXD4L1-1:7
4.0 lnc-FOXD4L1-1:7
4.1 lnc-FOXD4L1-1:7
5.0 lnc-FOXD4L1-1:7
5.1 LINC01961:2
5.2 LINC01961:9