Transcript: LINC01956:15

Basic information

LNCipedia transcript ID: LINC01956:15 
HGNC Gene Symbol: LINC01956    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1956
Ensembl Gene ID: ENSG00000258910
Ensembl Transcript ID: ENST00000557729
Location (hg38): chr2:118833825-118835110
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 695 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000557729.1; RP11-19E11.1-001; OTTHUMT00000410900.2; NONHSAT073945
Alternative gene names: ENSG00000258910.2; RP11-19E11.1; OTTHUMG00000170896.2; LINC01956


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -227.4623 non-coding 
CPAT coding probability 6.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01956:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-19E11.1.1-1:1
4.0 lnc-RP11-19E11.1.1-1:1
4.1 lnc-RP11-19E11.1.1-1:1
5.0 lnc-RP11-19E11.1.1-1:1
5.1 LINC01956:7
5.2 LINC01956:15