Transcript: LINC01954:15

Basic information

LNCipedia transcript ID: LINC01954:15 
LNCipedia gene ID: LINC01954
RefSeq ID: NR_110575
Location (hg38): chr2:10878267-10885118
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 463 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110575; NR_110575.1
Alternative gene names: LOC101929733


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -186.1978 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01954:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC092687.4.1-1:1
4.0 lnc-AC092687.4.1-1:1
4.1 lnc-AC092687.4.1-1:1
5.0 lnc-AC092687.4.1-1:1
5.1 LINC01954:6
5.2 LINC01954:15