Transcript: LINC01954:14

Basic information

LNCipedia transcript ID: LINC01954:14 
LNCipedia gene ID: LINC01954
Ensembl Gene ID: ENSG00000232056
Ensembl Transcript ID: ENST00000418835
Location (hg38): chr2:10847577-10854955
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 389 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000418835.1
Alternative gene names: ENSG00000232056.1; AC092687.4; AC092687.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.3051 non-coding 
CPAT coding probability 13.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01954:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC092687.4.1-2:1
4.1 lnc-AC092687.4.1-1:9
5.0 lnc-AC092687.4.1-1:9
5.1 LINC01954:5
5.2 LINC01954:14