Transcript: LINC01952:11

Basic information

LNCipedia transcript ID: LINC01952:11 
LNCipedia gene ID: LINC01952
Location (hg38): chr7:44848244-44849632
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 452 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014118; NONHSAT120403
Alternative gene names: XLOC_006069; linc-CCM2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -288.2505 non-coding 
CPAT coding probability 3.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01952:11 no no no no

Available literature

  1. Wang (2017), Differential expression profile of long noncoding RNAs in human chorionic villi of early recurrent miscarriage., Clin. Chim. Acta


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPIA-1:1
3.1 lnc-PPIA-1:2
4.0 lnc-PPIA-1:2
4.1 lnc-PPIA-1:2
5.0 lnc-PPIA-1:2
5.1 LINC01952:3
5.2 LINC01952:11