Transcript: LINC01949:5

Basic information

LNCipedia transcript ID: LINC01949:5 
LNCipedia gene ID: LINC01949
RefSeq ID: NR_130914
Location (hg38): chr5:87215735-87239201
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2898 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_130914.1
Alternative gene names: LOC55338


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.4208 non-coding 
CPAT coding probability 7.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01949:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01949:5
5.1 LINC01949:5
5.2 LINC01949:5