Transcript: LINC01899:12

Basic information

LNCipedia transcript ID: LINC01899:12 
HGNC Gene Symbol: LINC01899    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1899
Ensembl Gene ID: ENSG00000265352
Ensembl Transcript ID: ENST00000584810
Location (hg38): chr18:71779556-71782281
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 337 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000584810.1
Alternative gene names: ENSG00000265352.1; RP11-723G8.2; LINC01899


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -297.3936 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01899:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CBLN2-4:7
4.1 lnc-CBLN2-4:7
5.0 lnc-CBLN2-4:7
5.1 LINC01899:5
5.2 LINC01899:12