Transcript: LINC01896:40

Basic information

LNCipedia transcript ID: LINC01896:40 
LNCipedia gene ID: LINC01896
Location (hg38): chr18:78976820-78978822
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 647 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026585; NONHSAT060021
Alternative gene names: XLOC_012900; linc-MBP-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.6326 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01896:40 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC068473.1-2:2
3.1 lnc-AC068473.1-2:5
4.0 lnc-AC068473.1-2:5
4.1 lnc-AC068473.1-2:5
5.0 lnc-AC068473.1-2:5
5.1 LINC01896:18
5.2 LINC01896:40