Transcript: LINC01895:13

Basic information

LNCipedia transcript ID: LINC01895:13 
LNCipedia gene ID: LINC01895
Location (hg38): chr18:3347690-3350587
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 400 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026395; NONHSAT056981
Alternative gene names: XLOC_012746; linc-MYOM1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.1324 non-coding 
CPAT coding probability 2.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01895:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MYOM1-1:1
3.1 lnc-MYOM1-2:1
4.0 lnc-DLGAP1-10:2
4.1 lnc-DLGAP1-10:2
5.0 lnc-DLGAP1-10:2
5.1 LINC01895:6
5.2 LINC01895:13