Transcript: LINC01888:6

Basic information

LNCipedia transcript ID: LINC01888:6 
LNCipedia gene ID: LINC01888
Location (hg38): chr2:68834995-68837724
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 583 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237576.1|ENST00000457602.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -140.2444 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01888:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARHGAP25-1:3
5.0 lnc-ARHGAP25-1:3
5.1 LINC01888:3
5.2 LINC01888:6