Transcript: LINC01871:9

Basic information

LNCipedia transcript ID: LINC01871:9 
LNCipedia gene ID: LINC01871
Location (hg38): chr2:7725702-7730323
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 240 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004689; NONHSAT068960
Alternative gene names: XLOC_001331; linc-ID2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01871:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RNF144A-3:1
3.1 lnc-RNF144A-3:1
4.0 lnc-RNF144A-3:1
4.1 lnc-RNF144A-3:1
5.0 lnc-RNF144A-3:1
5.1 LINC01871:3
5.2 LINC01871:9