Transcript: LINC01847:10

Basic information

LNCipedia transcript ID: LINC01847:10 
HGNC Gene Symbol: LINC01847    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1847
Ensembl Gene ID: ENSG00000253311
Ensembl Transcript ID: ENST00000523311
Location (hg38): chr5:159698589-159761061
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1762 bp
Exons: 8
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523311.2
Alternative gene names: ENSG00000254199.2; AC008691.1; ENSG00000253311.2; LINC01847


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -69.7391 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01847:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PWWP2A-2:2
5.0 lnc-PWWP2A-2:2
5.1 LINC01847:6
5.2 LINC01847:10