Transcript: LINC01833:25

Basic information

LNCipedia transcript ID: LINC01833:25 
LNCipedia gene ID: LINC01833
Location (hg38): chr2:44919383-44939232
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8150 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259439.1|MICT00000188692.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.9368 non-coding 
CPAT coding probability 30.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01833:25 no no no no

Available literature

  1. Chen (2016), Detection and Analysis of Wnt Pathway Related lncRNAs Expression Profile in Lung Adenocarcinoma., Pathol. Oncol. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SIX2-3:13
5.0 lnc-SIX2-3:13
5.1 LINC01833:4
5.2 LINC01833:25