Transcript: LINC01830:10

Basic information

LNCipedia transcript ID: LINC01830:10 
LNCipedia gene ID: LINC01830
Location (hg38): chr2:21944609-21965551
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 579 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000430520; ENST00000430520.1; AC068490.1-001; OTTHUMT00000324013.1; NONHSAT069508
Alternative gene names: ENSG00000228999; AC068490.1; ENSG00000228999.1; OTTHUMG00000151805.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.3374 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01830:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-APOB-6:1
3.1 lnc-APOB-7:1
4.0 lnc-APOB-8:3
4.1 lnc-APOB-8:3
5.0 lnc-APOB-8:3
5.1 LINC01830:5
5.2 LINC01830:10