Transcript: LINC01814:9

Basic information

LNCipedia transcript ID: LINC01814:9 
HGNC Gene Symbol: LINC01814    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1814
Ensembl Gene ID: ENSG00000236008
Ensembl Transcript ID: ENST00000454224
RefSeq ID: NR_110257
Location (hg38): chr2:8559833-8583792
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8839 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000454224; ENST00000454224.1; AC011747.4-001; OTTHUMT00000323302.1; NONHSAT068997; NR_110257; NR_110257.1
Alternative gene names: ENSG00000236008; AC011747.4; ENSG00000236008.1; OTTHUMG00000151622.2; LINC01814; LOC101929567


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.4082 non-coding 
CPAT coding probability 12.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01814:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIDINS220-2:1
3.1 lnc-KIDINS220-4:1
4.0 lnc-KIDINS220-4:1
4.1 lnc-KIDINS220-4:1
5.0 lnc-KIDINS220-4:1
5.1 LINC01814:4
5.2 LINC01814:9