Transcript: LINC01802:3

Basic information

LNCipedia transcript ID: LINC01802:3 
HGNC Gene Symbol: LINC01802    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1802
Ensembl Gene ID: ENSG00000225064
Ensembl Transcript ID: ENST00000438824
Location (hg38): chr2:207260445-207270690
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 523 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000438824; ENST00000438824.1; AC007879.6-001; OTTHUMT00000337042.1; NONHSAT076599
Alternative gene names: ENSG00000225064; AC007879.6; ENSG00000225064.1; OTTHUMG00000154784.1; LINC01802


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.8959 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01802:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CREB1-1:1
3.1 lnc-CREB1-1:1
4.0 lnc-CREB1-1:1
4.1 lnc-CREB1-1:1
5.0 lnc-CREB1-1:1
5.1 LINC01802:2
5.2 LINC01802:3