Transcript: LINC01801:19

Basic information

LNCipedia transcript ID: LINC01801:19 
HGNC Gene Symbol: LINC01801    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1801
Ensembl Gene ID: ENSG00000267767
Ensembl Transcript ID: ENST00000587150
Location (hg38): chr19:34788582-34816900
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 739 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000587150.2
Alternative gene names: ENSG00000267767.2; CTC-523E23.4; LINC01801


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -146.2541 non-coding 
CPAT coding probability 2.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01801:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF599-2:4
4.0 lnc-ZNF599-2:4
4.1 lnc-ZNF599-2:4
5.0 lnc-ZNF599-2:4
5.1 LINC01801:8
5.2 LINC01801:19