Transcript: LINC01798:29

Basic information

LNCipedia transcript ID: LINC01798:29 
LNCipedia gene ID: LINC01798
Location (hg38): chr2:66691507-66696727
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 298 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT071240
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.5745 non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01798:29 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MEIS1-3:9
4.0 lnc-MEIS1-3:9
4.1 lnc-MEIS1-3:9
5.0 lnc-MEIS1-3:9
5.1 LINC01798:15
5.2 LINC01798:29