Transcript: LINC01764:5

Basic information

LNCipedia transcript ID: LINC01764:5 
HGNC Gene Symbol: LINC01764    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1764
Ensembl Gene ID: ENSG00000267308
Ensembl Transcript ID: ENST00000587970
Location (hg38): chr19:15835106-15835853
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 380 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT061520; ENST00000587970.1
Alternative gene names: ENSG00000267308.1; AC004510.3; LINC01764


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.7268 non-coding 
CPAT coding probability 2.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01764:5 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR10H1-1:2
4.0 lnc-OR10H1-1:2
4.1 lnc-OR10H1-1:2
5.0 lnc-OR10H1-1:2
5.1 LINC01764:2
5.2 LINC01764:5