Transcript: LINC01762:31

Basic information

LNCipedia transcript ID: LINC01762:31 
LNCipedia gene ID: LINC01762
Ensembl Gene ID: ENSG00000224950
Ensembl Transcript ID: ENST00000456414
Location (hg38): chr1:116493016-116499212
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2302 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000456414.2
Alternative gene names: ENSG00000224950.2; RP5-1086K13.1; AL390066.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.3449 non-coding 
CPAT coding probability 30.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01762:31 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CD58-1:2
4.1 lnc-ATP1A1OS-2:20
5.0 lnc-ATP1A1OS-2:20
5.1 LINC01762:7
5.2 LINC01762:31