Transcript: LINC01759:26

Basic information

LNCipedia transcript ID: LINC01759:26 
HGNC Gene Symbol: LINC01759    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1759
Ensembl Gene ID: ENSG00000234546
Ensembl Transcript ID: ENST00000412639
Location (hg38): chr1:9182204-9192089
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 985 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000412639.2
Alternative gene names: ENSG00000234546.2; RP3-510D11.2; ENSG00000234546.3; LINC01759


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.4498 non-coding 
CPAT coding probability 14.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01759:26 no no no no

Available literature

  1. Grossi (2018), A lncRNA GUARDINg genome integrity., Nat. Cell Biol.
  2. Léveillé (2015), Genome-wide profiling of p53-regulated enhancer RNAs uncovers a subset of enhancers controlled by a lncRNA., Nat Commun


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-H6PD-1:3
4.0 lnc-H6PD-1:3
4.1 lnc-H6PD-1:3
5.0 lnc-H6PD-1:3
5.1 LINC01759:11
5.2 LINC01759:26