Transcript: LINC01736:12

Basic information

LNCipedia transcript ID: LINC01736:12 
LNCipedia gene ID: LINC01736
Location (hg38): chr1:230002680-230007165
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 818 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT010106; FPKM1_group_2513_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.008 non-coding 
CPAT coding probability 1.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01736:12 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GALNT2-2:4
4.0 lnc-GALNT2-2:4
4.1 lnc-GALNT2-2:4
5.0 lnc-GALNT2-2:4
5.1 LINC01736:3
5.2 LINC01736:12